PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.007G085700.1
Common NamePOPTR_0007s06180g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 373aa    MW: 41847.4 Da    PI: 7.3032
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.007G085700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.93.7e-1286123238
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee.kvkeL 38 
                         +++k++rr+++NReAAr+sR+RKka++++Le  +vk +
  Potri.007G085700.1  86 PADKVQRRLAQNREAARKSRLRKKAYVQQLESsRVKLI 123
                         689***************************97244443 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-880133No hitNo description
SMARTSM003381.1E-785167IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.85287129IPR004827Basic-leucine zipper domain
PfamPF001704.2E-987124IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.92E-789127No hitNo description
CDDcd147081.04E-2189141No hitNo description
PROSITE patternPS00036092107IPR004827Basic-leucine zipper domain
PfamPF141442.9E-28175250IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MNSTSTQFVT PGRMGIYDPM HQIGMWGENF KSNGNPNTST MFIAGNPNAS ASMIIAPDTK  60
LDNQSEDTSQ GTLGHSNKYD QEASKPADKV QRRLAQNREA ARKSRLRKKA YVQQLESSRV  120
KLIQLEQELD RARQQGLYIG GGVDASQLGF GGPTNSGIAT FEMEYAHWLE EQNRHICDMR  180
TALNAHISDV ELRIRVESDM SHYFELFRLK ATAAKADVFY VMSGLWKSSA ERFFLWIGGF  240
RPSELLKILV PCMEPLTEQQ LMDVLNLRQS CQQAEDALSQ GLEKLQQNVA ETVAAGKLGE  300
ASYSHHMETA MEKLEALARF VQQADHIRQE TLQQMSRILT TRQAARGLLA LGEYFQRLRA  360
LSSLWATPRE PA*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1951190.0EF195119.1 Populus tremula x Populus alba TGA transcription factor 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002310002.20.0TGA-type basic leucine zipper protein TGA1.1
SwissprotQ392370.0TGA1_ARATH; Transcription factor TGA1
TrEMBLB9HFR00.0B9HFR0_POPTR; TGA-type basic leucine zipper protein TGA1.1
STRINGPOPTR_0007s06180.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Representative plantOGRP26791132
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.50.0bZIP family protein